The new release of the CIDeR database is now (22.09.2016) available. It provides more than 12.000 new interactions from 1300 scientific articles.
CIDeR is a manually curated database of interactions between disease-related elements such as biomolecules (proteins, metabolites etc.) and other factors (biological processes, phenotypes etc.). The aim of CIDeR is to serve as knowledge base for experimentally-oriented scientists and as resource for bioinformatics applications.
|Number and list of articles:||5326|
DePick manuscript networks:
The networks were created in a collaboration with the group of Monica Campillos. See "Systematic Identification of Pharmacological Targets from Small-Molecule Phenotypic Screens" (PMID: 27667560).
- How to query cider?
Per default the search space includes all diseases and all types of data. Queries ...
- Visualization of data in cider
Results of a query are initially shown as a list. On top of the ...
- Origin of the data in cider
Data in CIDeR are retrieved mostly from research articles and also from reviews. All ...
- Curation of data in cider
Information about disease-related interactions consists of three kinds of information. The central information is ...